| Bsoft 2.0.5 Bernard's software package

dynamic_programming.h
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9 #include "Matrix.h"
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11 // Function prototypes
12 long dp_matrix_scoring(Matrix mat, double gapopen, double gapextend);
13 int* dp_matrix_backtrace(Matrix mat, double gapopen, double gapextend, long& length);
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Matrix.h
Generalized matrix class.
length
double length(vector< T > v)
Definition: Vector3.h:528
dp_matrix_scoring
long dp_matrix_scoring(Matrix mat, double gapopen, double gapextend)
Calculates the scoring matrix in dynamic programming.
Definition: dynamic_programming.cpp:27
Matrix
Definition: Matrix.h:21
dp_matrix_backtrace
int * dp_matrix_backtrace(Matrix mat, double gapopen, double gapextend, long &length)
Backtraces the scoring matrix in dynamic programming.
Definition: dynamic_programming.cpp:84