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<section xmlns="http://docbook.org/ns/docbook" version="5.0" xmlns:xlink="http://www.w3.org/1999/xlink" xml:id="_dir_f0b99f13d5a4099927b8bc35dbd6b481">
<title>/Users/bernard/b20/bsoft/tcltk Directory Reference</title>
<indexterm><primary>/Users/bernard/b20/bsoft/tcltk Directory Reference</primary></indexterm>
<simplesect>
    <title>Files    </title>
        <itemizedlist>
            <listitem><para>file <link linkend="_brun__panel_8tcl">brun_panel.tcl</link></para>

<para>Panel to construct and run Bsoft command lines. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow_8cpp">bshow.cpp</link></para>

<para>A shared object to load Bsoft image files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__boxes_8tcl">bshow_boxes.tcl</link></para>

<para>Procedures to create, move and destroy particle boxes. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__ctf_8tcl">bshow_ctf.tcl</link></para>

<para>Procedures to do CTF fitting. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__diffraction_8tcl">bshow_diffraction.tcl</link></para>

<para>Procedures to analyze diffraction patterns. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__filament_8tcl">bshow_filament.tcl</link></para>

<para>Procedures to create, move and destroy filament selections. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__file_8tcl">bshow_file.tcl</link></para>

<para>Procedures to manage file I/O. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__getinfo_8tcl">bshow_getinfo.tcl</link></para>

<para>Procedures to show image information. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__graph_8tcl">bshow_graph.tcl</link></para>

<para>Procedures to draw graphs in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__helix_8tcl">bshow_helix.tcl</link></para>

<para>Procedures to manage helical diffraction patterns. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__histogram_8tcl">bshow_histogram.tcl</link></para>

<para>Procedures to draw a histogram in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__image_8tcl">bshow_image.tcl</link></para>

<para>Procedures for manipulating images in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__magnify_8tcl">bshow_magnify.tcl</link></para>

<para>Procedures for rendering the magnifying window in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__misc_8tcl">bshow_misc.tcl</link></para>

<para>Miscellaneous procedures for Bshow and other scripts. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__model_8tcl">bshow_model.tcl</link></para>

<para>Procedures to create and destroy model components and links in images. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__param_8tcl">bshow_param.tcl</link></para>

<para>Procedures to read and write parameter files. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__scales_8tcl">bshow_scales.tcl</link></para>

<para>Procedures to manage scales for image display. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__select_8tcl">bshow_select.tcl</link></para>

<para>Procedures to draw selections in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__tomo_8tcl">bshow_tomo.tcl</link></para>

<para>Procedures to manage tomographic images. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__tools_8tcl">bshow_tools.tcl</link></para>

<para>The toolbox window. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__voxels_8tcl">bshow_voxels.tcl</link></para>

<para>Procedures to record voxel values in Bshow. </para>
</listitem>
            <listitem><para>file <link linkend="_bshow__xtal_8tcl">bshow_xtal.tcl</link></para>

<para>Procedures to manage crystallographic images. </para>
</listitem>
            <listitem><para>file <link linkend="_bsoft__tcl_8cpp">bsoft_tcl.cpp</link></para>

<para>A stub function to interface the Bsoft library within TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_btext_8tcl">btext.tcl</link></para>

<para>Window to show text information. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bbox_8cpp">tcltk_bbox.cpp</link></para>

<para>A shared object to manage micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bbox_8h">tcltk_bbox.h</link></para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bfil_8cpp">tcltk_bfil.cpp</link></para>

<para>A shared object to manage micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bfil_8h">tcltk_bfil.h</link></para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bhelix_8cpp">tcltk_bhelix.cpp</link></para>

<para>A shared object to manage micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bhelix_8h">tcltk_bhelix.h</link></para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bimage_8cpp">tcltk_bimage.cpp</link></para>

<para>A shared object to load Bsoft image files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bimage_8h">tcltk_bimage.h</link></para>

<para>A shared object to load Bsoft image files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmarker_8cpp">tcltk_bmarker.cpp</link></para>

<para>A shared object to manage markers in micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmarker_8h">tcltk_bmarker.h</link></para>

<para>A shared object to manage markers in micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmg_8cpp">tcltk_bmg.cpp</link></para>

<para>A shared object to manage micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmg_8h">tcltk_bmg.h</link></para>

<para>A shared object to manage boxes in micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmodel_8cpp">tcltk_bmodel.cpp</link></para>

<para>A shared object to load Bsoft model files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bmodel_8h">tcltk_bmodel.h</link></para>

<para>A shared object to manage model parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bxtal_8cpp">tcltk_bxtal.cpp</link></para>

<para>A shared object to manage micrograph parameter files in TCL/Tk. </para>
</listitem>
            <listitem><para>file <link linkend="_tcltk__bxtal_8h">tcltk_bxtal.h</link></para>
</listitem>
        </itemizedlist>
</simplesect>
</section>
