| Bsoft 2.0.5 Bernard's software package

model_extract_build.h
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1
9 #include "rwmodel.h"
10 #include "rwimg.h"
11
12 // Function prototypes
13 int model_refine_components(Bmodel* model, Bstring* ct_names, Bimage* ptemp,
14 Bimage* pmask, Bimage* pfsmask, int max_iter, double viewstep, double rotstep,
15 double hires, double lores, double accuracy, double max_shift,
16 double max_view_angle, double max_rot_angle, int shift_flag);
17 int model_refine_link_positions(Bmodel* model, Bimage* ptemp, Bimage* pmask,
18 Bimage* pfsmask, double hires, double lores, double max_shift, int shift_flag, double bias);
19 Bimage* model_average_component_density(Bmodel* model, Vector3<long> size, Vector3<double> origin, int npt);
20 Bimage* model_extract_component_densities(Bmodel* model, Vector3<long> size, Vector3<double> origin);
21 Bimage* model_average_link_density(Bmodel* model, Vector3<long> size, Vector3<double> origin);
22 Bimage* model_build_from_component_density(Bmodel* model, Vector3<long> size,
23 Vector3<double> origin, int flags);
24 Bimage* model_build_from_link_density(Bmodel* model, Bstring& linkmap,
25 Vector3<long> size, Vector3<double> origin, int link_select, int flags);
26
model_average_component_density
Bimage * model_average_component_density(Bmodel *model, Vector3< long > size, Vector3< double > origin, int npt)
Averages the density associated with each component type in a model.
Definition: model_extract_build.cpp:703
Bimage
General image parameter class.
Definition: Bimage.h:163
model_build_from_link_density
Bimage * model_build_from_link_density(Bmodel *model, Bstring &linkmap, Vector3< long > size, Vector3< double > origin, int link_select, int flags)
Builds a new map from a density of a link in a model.
Definition: model_extract_build.cpp:1139
model_extract_component_densities
Bimage * model_extract_component_densities(Bmodel *model, Vector3< long > size, Vector3< double > origin)
Extracts all densities associated with components in a model.
Definition: model_extract_build.cpp:836
link_select
Tcl_Obj * link_select(Bmodel *model, int objc, Tcl_Obj *CONST objv[])
Definition: tcltk_bmodel.cpp:1491
model_refine_link_positions
int model_refine_link_positions(Bmodel *model, Bimage *ptemp, Bimage *pmask, Bimage *pfsmask, double hires, double lores, double max_shift, int shift_flag, double bias)
Refines link positions by cross-correlation.
Definition: model_extract_build.cpp:559
model_average_link_density
Bimage * model_average_link_density(Bmodel *model, Vector3< long > size, Vector3< double > origin)
Extracts a density associated with each link in a model.
Definition: model_extract_build.cpp:917
model
Bmodel * model
Definition: bshow.cpp:32
Bstring
Definition: Bstring.h:29
model_refine_components
int model_refine_components(Bmodel *model, Bstring *ct_names, Bimage *ptemp, Bimage *pmask, Bimage *pfsmask, int max_iter, double viewstep, double rotstep, double hires, double lores, double accuracy, double max_shift, double max_view_angle, double max_rot_angle, int shift_flag)
Refines component views and positions by cross-correlation.
Definition: model_extract_build.cpp:300
rwmodel.h
Header file for reading and writing atomic model files.
Vector3< long >
model_build_from_component_density
Bimage * model_build_from_component_density(Bmodel *model, Vector3< long > size, Vector3< double > origin, int flags)
Builds a new map from a densities of components in a model.
Definition: model_extract_build.cpp:1008
Bmodel
Definition: rwmodel.h:119
rwimg.h
Header file for 2D and 3D image I/O.