| Bsoft 2.0.5 Bernard's software package

Here is a list of all file members with links to the files they belong to:

### - v -

- variancePicker() : bshow_boxes.tcl
- vax2ieee() : utilities.h , utilities.cpp
- vecmax() : Vector3.h
- vecmin() : Vector3.h
- vector3_catmull_rom_interpolate() : spline.cpp
- vector3_catmull_rom_spline() : spline.h , spline.cpp
- vector3_closest_to_intersection() : Bimage_symmetry.cpp
- vector3_difference_PBC() : Vector3.h
- vector3_inside_outside() : Bimage_stats.cpp
- vector3_origin_to_shift() : Vector3.h
- vector3_random() : random_numbers.h , random_numbers.cpp , random_numbers.h
- vector3_random_gaussian() : random_numbers.h , random_numbers.cpp
- vector3_random_unit_sphere() : random_numbers.h , random_numbers.cpp
- vector3_rotate() : Quaternion.h
- vector3_scalar_range() : Vector3.h
- vector3_set_PBC() : Vector3.h
- vector3_spline_from_nodes() : mg_extract.h , mg_extract.cpp
- vector3_xy_random_gaussian() : random_numbers.h , random_numbers.cpp
- VERB_DEBUG : utilities.h
- VERB_DEBUG_DM : utilities.h
- VERB_DEBUG_STAR : utilities.h
- VERB_DEBUG_XML : utilities.h
- VERB_FULL : utilities.h
- VERB_LABEL : utilities.h
- VERB_MEMORY : utilities.h
- VERB_NONE : utilities.h
- VERB_PROCESS : utilities.h
- VERB_RESULT : utilities.h
- VERB_STATS : utilities.h
- VERB_TIME : utilities.h
- verbose : symmetry.cpp , string_util.cpp , timer.cpp , simplex.cpp , random_numbers.cpp , Quaternion.cpp , options.cpp , moving_average.cpp , matrix_util.cpp , matrix_linear.cpp , Matrix3.cpp , matrix.cpp , math_util.cpp , marker.cpp , linked_list.cpp , file_util.cpp , fft.cpp , tcltk_bbox.cpp , tcltk_bmg.cpp , cluster.cpp , Bstring.cpp , Bplot.cpp , binomial.cpp , rwtree.cpp , rwsymop.cpp , rwstar.cpp , rwresprop.cpp , rwmodel_param.cpp , rwmgXML.cpp , rwmgSTAR.cpp , rwmgSerialEM.cpp , rwmgRELION.cpp , rwmgIMOD.cpp , rwmgEMX.cpp , bcatmol.cpp , rwmd.cpp , rwgencode.cpp , rwFSC_XML.cpp , rwatomprop.cpp , rwWAH.cpp , rwPIR.cpp , rwPhylip.cpp , rwPDB.cpp , rwmolecule.cpp , rwmol_text.cpp , rwmol_star.cpp , rwGROMACS.cpp , rwGenBank.cpp , rwFASTA.cpp , bmodmap.cpp , mg_refine.cpp , rwmodel_xml.cpp , rwmodel_vega.cpp , rwmodel_star.cpp , rwmodel_mol.cpp , rwmodel_cmm.cpp , rwmodel_bild.cpp , rwmodel.cpp , rwXPLOR.cpp , rwTGA.cpp , rwSUPRIM.cpp , rwSPIDER.cpp , rwSPE.cpp , rwSitus.cpp , rwSER.cpp , rwRAW.cpp , mg_subtomo.cpp , rwPNM.cpp , rwPIF.cpp , rwPIC.cpp , rwMRC.cpp , rwMIFF.cpp , rwMFF.cpp , rwkernel.cpp , bmodmask.cpp , rwimg.cpp , rwIMAGIC.cpp , rwHKL.cpp , rwGRD.cpp , rwGOODFORD.cpp , rwEM.cpp , mg_tomo_rec.cpp , mg_tomo_resol.cpp , rwDM.cpp , rwDI.cpp , rwCCP4.cpp , rwBrookhavenSTEM.cpp , rwBRIX.cpp , rwBIORAD.cpp , rwBCR.cpp , rwASCII.cpp , radonrecon.cpp , radon.cpp , ps_views.cpp , ps_tree.cpp , ps_sequence.cpp , ps_plot.cpp , ps_model.cpp , bcatseq.cpp , ps_marker.cpp , ps_ctf_plot.cpp , seq_util.cpp , seq_analysis.cpp , seq_align.cpp , molecule_to_map.cpp , mol_water.cpp , bmodsel.cpp , mol_transform.cpp , mol_symmetry.cpp , mol_select.cpp , mol_param.cpp , mol_monte.cpp , mol_md.cpp , mol_map_energy.cpp , mg_tomo_track.cpp , mol_compare.cpp , mol_bonds.cpp , mol_alpha.cpp , model_views.cpp , model_util.cpp , model_transform.cpp , model_symmetry.cpp , mg_tomography.cpp , model_select.cpp , model_poly_spiral.cpp , model_poly_delta.cpp , model_poly.cpp , model_plane.cpp , model_path.cpp , model_occupancy.cpp , bmodsym.cpp , model_multifit.cpp , model_mechanics.cpp , model_mask.cpp , model_map.cpp , model_links.cpp , model_extract_build.cpp , mg_xtal.cpp , model_color.cpp , bcc.cpp , bmodview.cpp , model_compare.cpp , model_create.cpp , bmol.cpp , bclass.cpp , bmoledit.cpp , bmolhel.cpp , mg_reconstruct.cpp , mg_random.cpp , mg_processing.cpp , mg_pick.cpp , mg_particles.cpp , mg_particle_select.cpp , mg_orient.cpp , tcltk_bmodel.cpp , mg_multiple.cpp , mg_merge.cpp , mg_marker.cpp , mg_img_proc.cpp , mg_helix.cpp , mg_hand.cpp , bcolour.cpp , bmolsym.cpp , mg_ctf.cpp , mg_class.cpp , mg_align.cpp , jviews.cpp , jsubtomo.cpp , jpartdif.cpp , jave.cpp , model_neighbors.cpp , Bimage_transform.cpp , Bimage_topo.cpp , Bimage_symmetry.cpp , Bimage_stats.cpp , Bimage_segment.cpp , Bimage_search.cpp , bmontage.cpp , bcomplex.cpp , Bimage_rescale.cpp , Bimage_reconstruct.cpp , Bimage_project.cpp , Bimage_powerspectrum.cpp , Bimage_polar.cpp , Bimage_noise.cpp , Bimage_nad.cpp , bmonte.cpp , Bimage_mask.cpp , Bimage_histogram.cpp , Bimage_helix.cpp , Bimage_fspace.cpp , Bimage_filter.cpp , Bimage_fft.cpp , Bimage_extract.cpp , bmultifit.cpp , Bimage_correlate.cpp , Bimage_complex.cpp , Bimage_combine.cpp , Bimage_color.cpp , Bimage_bin.cpp , Bimage_background.cpp , Bimage_align.cpp , spline.cpp , emgrand.cpp , dmerge.cpp , dimgstats.cpp , dhand.cpp , dcount.cpp , bzfft.cpp , bxml.cpp , bconvert.cpp , bwater.cpp , btube.cpp , btree.cpp , btrack.cpp , btomres.cpp , btomrec.cpp , btompart.cpp , rwmg.cpp , btomaln.cpp , btile.cpp , bsymcomp.cpp , bsym.cpp , bsurf.cpp , bsupix.cpp , bstar.cpp , rwEMBL.cpp , bsplitmol.cpp , bsplit.cpp , bspiral.cpp , bsim.cpp , bshell.cpp , bsf.cpp , bseries.cpp , rwPostScript.cpp , bseq.cpp , bsegment.cpp , bscale.cpp , rwIP.cpp , brefine.cpp , breconstruct.cpp , brecmod.cpp , rwDX.cpp , brandom.cpp , bradsec.cpp , bradial.cpp , bproject.cpp , bpoly.cpp , bplane.cpp , bpick.cpp , ps_micrograph.cpp , bpath.cpp , bpatch.cpp , bpartsel.cpp , mol_util.cpp , bpart.cpp , bparam.cpp , borient.cpp , mol_edit.cpp , bmultimask.cpp , model_shell.cpp , bmultislice.cpp , bcormut.cpp , bnad.cpp , bnorm.cpp , tcltk_bfil.cpp , tcltk_bmarker.cpp , bcrystal.cpp , bop.cpp , bctf.cpp , bcyl.cpp , bpartmulti.cpp , bdelta.cpp , tcltk_bhelix.cpp , bdens.cpp , bmodel.cpp , bmodedit.cpp , bmodcomp.cpp , mg_multislice.cpp , bmod2part.cpp , bmm.cpp , bmissing.cpp , mg_extract.cpp , bmgft.cpp , bmgconvert.cpp , bmgalign.cpp , img_combine.cpp , bmg.cpp , bmedian.cpp , bmd.cpp , bphase.cpp , bmatrix.cpp , bmatch.cpp , bmaskmod.cpp , Bimage_montage.cpp , bmark.cpp , bmapdist.cpp , blocres.cpp , utilities.cpp , blevel.cpp , bkernel.cpp , bint.cpp , Bimage.cpp , bico.cpp , bhisto.cpp , bhelix.cpp , dynamic_programming.cpp , bheight.cpp , bhead.cpp , bgraphseg.cpp , btomo.cpp , bftr.cpp , bflood.cpp , bflat.cpp , rwClustal.cpp , bfind.cpp , bfilwidth.cpp , bfilter.cpp , bseqaln.cpp , bfil.cpp , bresolve.cpp , bfcc.cpp , rwDSN6.cpp , bdif.cpp , tcltk_bimage.cpp , bdual.cpp , bedge.cpp , Transform.cpp , UnitCell.cpp , beditimg.cpp , brecadd.cpp , bfft.cpp , View.cpp , bfile.cpp , bshow.cpp , Matrix.h , bfix.cpp , bspr.cpp , mol_water.h , bcat.cpp , bmodcol.cpp , bbif.cpp , mg_ctf_fit.cpp , bass.cpp , bmg2imod.cpp , bampweigh.cpp , Bimage_resolution.cpp , balign.cpp , bmask.cpp , baddmask.cpp , Bimage_edit.cpp , b3v.cpp , bimg.cpp , proj_tool.cpp , ctf.cpp , options.h , bgex.cpp , img_radon.cpp , tcltk_bxtal.cpp , kernlut.cpp , bhelcross.cpp , bxb.cpp , radon_util.cpp , badd.cpp , blocfilt.cpp , bafm.cpp , balpha.cpp , bmaxpow.cpp , Bimage_resize.cpp , bar.cpp , bbackproj.cpp , bmgtransfer.cpp , bbild.cpp
- version() : rwDM.cpp
- view_array() : View.h , View.cpp
- view_from_imagic_euler() : rwIMAGIC.cpp
- view_from_spider_euler() : rwSPIDER.cpp
- view_from_suprim_euler() : rwSUPRIM.cpp
- view_list_expand_angles() : View.cpp , View.h
- view_list_subset() : View.cpp , View.h
- view_random_reslice() : View.h , View.cpp
- view_symmetry_reference() : symmetry.cpp , symmetry.h
- views_for_refinement() : View.h , View.cpp
- views_from_model() : model_views.h , model_views.cpp
- views_from_models() : model_views.cpp , model_views.h
- views_from_project() : mg_processing.h , mg_processing.cpp
- views_within_limits() : View.h , View.cpp
- volume() : Vector3.h
- Voxels() : bshow_voxels.tcl